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bedtools-software [2019/09/29 18:21] aorthbedtools-software [2023/02/13 14:26] (current) aorth
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 <code>$ cd /tmp <code>$ cd /tmp
 $ wget https://github.com/arq5x/bedtools2/releases/download/v2.29.0/bedtools-2.29.0.tar.gz $ wget https://github.com/arq5x/bedtools2/releases/download/v2.29.0/bedtools-2.29.0.tar.gz
 +$ tar xf bedtools-2.29.0.tar.gz
 $ cd bedtools2 $ cd bedtools2
-scl enable devtoolset-7 bash+# added in 2023-02 while re-compiling on CentOS Stream 8 
 +sed -i 's/python/python3/' Makefile
 $ make $ make
 $ sudo mkdir -p /export/apps/bedtools/2.29.0 $ sudo mkdir -p /export/apps/bedtools/2.29.0
 $ sudo chown aorth /export/apps/bedtools/2.29.0 $ sudo chown aorth /export/apps/bedtools/2.29.0
-$ sudo mkdir -p /export/apps/bedtools/2.29.0 
 $ make install prefix=/export/apps/bedtools/2.29.0 $ make install prefix=/export/apps/bedtools/2.29.0
 $ sudo chown -R root:root /export/apps/bedtools/2.29.0</code> $ sudo chown -R root:root /export/apps/bedtools/2.29.0</code>
bedtools-software.1569781266.txt.gz · Last modified: 2019/09/29 18:21 by aorth