Index of /beca/bioinfo/scripts

• Parent Directory
• .DS_Store
• AddReadGroup.pl
• BWAaln.sh
• BlastParse.pl
• Boxplots.sh
• CollapseDuplicateCount.sh
• DESeqScript.R
• DESeq_1.12.1.tgz
• EigenSoft/
• GOcollapser.py
• GenomeAnalysisTK_2_5.jar
• Heatmapping.R
• MarkDuplicates.jar
• MetaTableAssembly.sh
• PECombiner.sh
• ParseData2BigTable.py
• ParseExpression2BigTable.py
• ParseExpression2BigTable_counts.py
• QualityStats.sh
• ReParseBlastbycutoffs.py
• SAM1.pdf
• SNP_detection.sh
• TrimClip.sh
• VQSR.sh
• convert_bam_to_sam.sh
• convert_to_bam_and_dedup.sh
• count_fasta.pl
• countxpression.py
• fastato1line.py
• fastqcombinepairedend.py
• fastqduplicatecounter.py
• getgenosfromvcf.py
• gpl.txt
• graphs2pdf.sh
• make_bayescan_input.py
• merge_files.py
• nrblastparse.sh
• parse_blast.py
• parse_blastx2Sprot.py
• realigner.sh
• splitlistbymaxperfile.py
• totalannotation_v1-1.py
• vcf2smartpca.py