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beagle-software [2021/06/21 07:09]
aorth
beagle-software [2021/06/21 07:52] (current)
aorth
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   * Latest Version: 3.1.2   * Latest Version: 3.1.2
   * Added: August, 2015   * Added: August, 2015
-  * Updated: September2019+  * Updated: June2021
   * Link: https://github.com/beagle-dev/beagle-lib   * Link: https://github.com/beagle-dev/beagle-lib
      
Line 17: Line 17:
 <code>$ module load beagle/3.1.2</code> <code>$ module load beagle/3.1.2</code>
  
-Beagle is not useful by itself, but you can use it to speed up [[https://hpc.ilri.cgiar.org/beast-software|BEAST]].+Beagle is not useful by itself, but you can use it to speed up [[https://hpc.ilri.cgiar.org/beast-software|BEAST]] and [[https://hpc.ilri.cgiar.org/beast2-software|BEAST2]].
  
 ===== Installation ====== ===== Installation ======
 Notes from the sysadmin during installation: Notes from the sysadmin during installation:
  
-<code>cd /tmp +<code>git clone https://github.com/beagle-dev/beagle-lib.git -b v3.1.2 
-$ sudo yum install libtool +$ cd beagle-lib 
-$ wget https://github.com/beagle-dev/beagle-lib/archive/v3.1.2.tar.gz +$ sed -i 's/compute_30/compute_70/' configure.ac
-$ tar xf v3.1.2.tar.gz  +
-$ cd beagle-lib-3.1.2+
 $ scl enable devtoolset-7 bash $ scl enable devtoolset-7 bash
 +$ sudo yum install libtool
 $ ./autogen.sh $ ./autogen.sh
 $ ./configure --prefix=/export/apps/beagle/3.1.2 $ ./configure --prefix=/export/apps/beagle/3.1.2
Line 34: Line 33:
 $ make install $ make install
 $ sudo chown -R root:root /export/apps/beagle/3.1.2</code> $ sudo chown -R root:root /export/apps/beagle/3.1.2</code>
 +
 +**Note (2021-06-21):** Re-compiled on compute06 with support for NVIDIA GPU compute capability 7.0, but still seems to run on other nodes without modification.
beagle-software.1624259373.txt.gz · Last modified: 2021/06/21 07:09 by aorth