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beagle-software [2018/10/21 13:43]
aorth
beagle-software [2021/06/21 07:52] (current)
aorth
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 ===== Information ===== ===== Information =====
  
-  * Latest Version: 3.0.2+  * Latest Version: 3.1.2
   * Added: August, 2015   * Added: August, 2015
-  * Updated: October2018+  * Updated: June2021
   * Link: https://github.com/beagle-dev/beagle-lib   * Link: https://github.com/beagle-dev/beagle-lib
      
Line 15: Line 15:
  
 Load one version into your environment: Load one version into your environment:
-<code>$ module load beagle/3.0.2</code>+<code>$ module load beagle/3.1.2</code>
  
-Beagle is not useful by itself, but you can use it to speed up BEAST.+Beagle is not useful by itself, but you can use it to speed up [[https://hpc.ilri.cgiar.org/beast-software|BEAST]] and [[https://hpc.ilri.cgiar.org/beast2-software|BEAST2]].
  
 ===== Installation ====== ===== Installation ======
 Notes from the sysadmin during installation: Notes from the sysadmin during installation:
  
-<code>cd /tmp +<code>git clone https://github.com/beagle-dev/beagle-lib.git -b v3.1.2 
-$ wget https://github.com/beagle-dev/beagle-lib/archive/v3.0.2.tar.gz +$ cd beagle-lib 
-$ tar xf v3.0.2.tar.gz +$ sed -i 's/compute_30/compute_70/' configure.ac 
-$ cd beagle-lib-3.0.2+$ scl enable devtoolset-7 bash 
 +$ sudo yum install libtool
 $ ./autogen.sh $ ./autogen.sh
-$ ./configure --prefix=/export/apps/beagle/3.0.2 +$ ./configure --prefix=/export/apps/beagle/3.1.2 
-$ sudo mkdir -p /export/apps/beagle/3.0.2 +$ sudo mkdir -p /export/apps/beagle/3.1.2 
-$ sudo chown aorth /export/apps/beagle/3.0.2+$ sudo chown aorth /export/apps/beagle/3.1.2
 $ make install $ make install
-$ sudo chown -R root:root /export/apps/beagle/3.0.2</code>+$ sudo chown -R root:root /export/apps/beagle/3.1.2</code> 
 + 
 +**Note (2021-06-21):** Re-compiled on compute06 with support for NVIDIA GPU compute capability 7.0, but still seems to run on other nodes without modification.
beagle-software.1540129420.txt.gz · Last modified: 2018/10/21 13:43 by aorth