augustus-software
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| Both sides previous revisionPrevious revisionNext revision | Previous revisionLast revisionBoth sides next revision | ||
| augustus-software [2017/05/23 15:02] – aorth | augustus-software [2018/01/07 00:34] – aorth | ||
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| Line 4: | Line 4: | ||
| ===== Information ===== | ===== Information ===== | ||
| - | * Version: 3.2.1 | + | * Version: 3.3 |
| - | * Added: | + | * Added: |
| * Link: http:// | * Link: http:// | ||
| Line 14: | Line 14: | ||
| </ | </ | ||
| - | Load augustus | + | Load one version into your environment: |
| - | < | + | < |
| ===== Installation ====== | ===== Installation ====== | ||
| Line 21: | Line 21: | ||
| < | < | ||
| - | $ wget http:// | + | $ wget http:// |
| - | $ tar -xvf augustus-3.2.1.tar.gz | + | $ tar xf augustus-3.3.tar.gz |
| - | $ cd augustus-3.2.1 | + | $ cd augustus |
| - | $ sed -i 's/^# | + | $ sed -i ' |
| - | $ cd src | + | $ export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/ |
| + | $ sed -i ' | ||
| + | $ sed -i ' | ||
| + | $ sudo yum install boost-devel | ||
| + | $ make clean | ||
| $ make | $ make | ||
| - | $ cd ../ | + | $ sudo mkdir /export/ |
| - | $ sudo mkdir -p / | + | $ sudo chown aorth / |
| - | $ sudo cp -r . / | + | $ make INSTALLDIR=/ |
| - | </ | + | $ find /export/ |
| + | $ sudo chown -R root: | ||
| + | Augustus requires bamtools at compile time (but not during run time). | ||
augustus-software.txt · Last modified: 2018/01/07 15:40 by aorth