abyss-software
Differences
This shows you the differences between two versions of the page.
| Both sides previous revisionPrevious revision | Next revisionBoth sides next revision | ||
| abyss-software [2017/10/14 13:39] – aorth | abyss-software [2018/11/17 20:17] – aorth | ||
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| ===== Information ===== | ===== Information ===== | ||
| - | * Version: 2.0.2 | + | * Version: 2.1.4 |
| * Added: August, 2013 | * Added: August, 2013 | ||
| - | * Updated: | + | * Updated: |
| - | * K-mer size: 64 (default at compile time) | + | * K-mer size: 128 (default at compile time) |
| * Link: http:// | * Link: http:// | ||
| Line 16: | Line 16: | ||
| Load one version into your environment and run it: | Load one version into your environment and run it: | ||
| - | < | + | < |
| $ abyss-pe help</ | $ abyss-pe help</ | ||
| Line 23: | Line 23: | ||
| < | < | ||
| - | $ wget http:// | + | $ wget http:// |
| - | $ tar xf abyss-2.0.2.tar.gz | + | $ tar xf abyss-2.1.4.tar.gz |
| - | $ cd abyss-2.0.2 | + | $ cd abyss-2.1.4 |
| - | $ scl enable devtoolset-4 bash | + | $ sudo yum install sparsehash-devel.x86_64 openmpi-devel.x86_64 |
| - | $ ./configure --prefix=/ | + | $ ./configure --prefix=/ |
| $ make -j4 | $ make -j4 | ||
| - | $ sudo mkdir / | + | $ sudo mkdir -p / |
| - | $ sudo chown aorth / | + | $ sudo chown aorth / |
| $ make install | $ make install | ||
| - | $ sudo chown -R root:root / | + | $ sudo chown -R root:root / |
abyss-software.txt · Last modified: 2019/07/10 14:25 by aorth