ViennaRNA

The ViennaRNA Package consists of a C code library and several stand-alone programs for the prediction and comparison of RNA secondary structures.

• Latest version: 2.4.14
• Added: April, 2020
• Link: https://www.tbi.univie.ac.at/RNA

See versions of vienna which are available:

$ module avail vep

Load one version into your environment and run it:

$ module load viennarna/2.4.14

Notes from the sysadmin during installation:

$ cd /tmp
$ wget https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_4_x/ViennaRNA-2.4.14.tar.gz
$ tar xf ViennaRNA-2.4.14.tar.gz 
$ cd ViennaRNA-2.4.14
$ scl enable devtoolset-7 bash
$ ./configure --prefix=/export/apps/viennarna/2.4.14
$ make
$ make check
$ sudo mkdir -p /export/apps/viennarna/2.4.14
$ sudo chown aorth /export/apps/viennarna/2.4.14
$ make install
$ sudo chown -R root:root /export/apps/viennarna/2.4.14