tools for processing and annotating VCF files, with focus on Plasmodium spp.
See versions of vcfdo which are available:
$ module avail vcfdo
Load one version into your environment and run it:
$ module load vcfdo/git-508cc19b $ vcfdo
Notes from the sysadmin during installation:
$ sudo mkdir -p /export/apps/vcfdo/git-508cc19b $ sudo chown -R aorth:aorth /export/apps/vcfdo/git-508cc19b $ module load python/3.7 $ python3 -m venv /export/apps/vcfdo/git-508cc19b $ source /export/apps/vcfdo/git-508cc19b/bin/activate $ pip install --upgrade pip setuptools $ pip install git+https://github.com/IDEELResearch/vcfdo $ sudo chown -R root:root /export/apps/vcfdo/git-508cc19b