Tandem Repeats Finder

Tandem repeats finder: a program to analyze DNA sequences.

• Version: 4.0.9
• Added: February, 2015
• Updated: November, 2020
• Link: https://github.com/Benson-Genomics-Lab/TRF

See versions of trf which are available:

$ module avail trf

Load one version into your environment and run it:

$ module load trf/4.0.9
$ trf

Notes from the sysadmin during installation:

$ wget https://github.com/Benson-Genomics-Lab/TRF/releases/download/v4.09.1/trf409.linux64
$ chmod +x trf409.linux64
$ sudo mkdir -p /export/apps/trf/4.0.9/bin
$ sudo cp trf409.linux64 /export/apps/trf/4.0.9/bin
$ sudo ln -s /export/apps/trf/4.0.9/bin/trf409.linux64 /export/apps/trf/4.0.9/bin/trf