Table of Contents

RepeatScout

RepeatScout - De Novo Repeat Finder.

Information

Usage

See versions of repeatscout which are available:

$ module avail repeatscout

Load one version into your environment and run it:

$ module load repeatscout
$ RepeatScout

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ wget http://www.repeatmasker.org/RepeatScout-1.0.6.tar.gz
$ tar xf RepeatScout-1.0.6.tar.gz 
$ cd RepeatScout-1.0.6
$ make
$ rm *.o
$ sudo mkdir -p /export/apps/repeatscout/1.0.6
$ sudo cp -r * /export/apps/repeatscout/1.0.6