MECAT

An ultra-fast mapping, error correction and de novo assembly tool for single-molecule sequencing reads.

• Version: git-d04bfa84 (developer does not tag proper release versions)
• Added: November, 2018
• Link: https://github.com/xiaochuanle/MECAT

See versions of MECAT which are available:

$ module avail MECAT

Load one version into your environment and run it:

$ module load MECAT/git-d04bfa84
$ mecat2pw
$ mecat2canu

Notes from the sysadmin during installation:

$ cd /tmp
$ git clone https://github.com/xiaochuanle/MECAT.git
$ cd MECAT
$ make
$ sudo mkdir -p /export/apps/MECAT/git-d04bfa84
$ sudo cp -r Linux-amd64 /export/apps/MECAT/git-d04bfa84