InterPro is a database which integrates together predictive information about proteins' function from a number of partner resources, giving an overview of the families that a protein belongs to and the domains and sites it contains.
Check for available versions:
$ module avail interproscan
Load the latest version into your environment:
$ module load interproscan/5.25-64.0
Notes from the sysadmin during installation:
$ cd /tmp $ wget ftp://ftp.ebi.ac.uk/pub/software/unix/iprscan/5/5.25-64.0/interproscan-5.25-64.0-64-bit.tar.gz $ wget ftp://ftp.ebi.ac.uk/pub/software/unix/iprscan/5/5.25-64.0/interproscan-5.25-64.0-64-bit.tar.gz.md5 $ md5sum -c interproscan-5.25-64.0-64-bit.tar.gz.md5 $ tar -pxvzf interproscan-5.25-64.0-*-bit.tar.gz $ cd interproscan-5.25-64.0/data $ wget ftp://ftp.ebi.ac.uk/pub/software/unix/iprscan/5/data/panther-data-11.1.tar.gz $ tar -pxvzf panther-data-11.1.tar.gz $ sudo mkdir /export/apps/interproscan/5.25-64.0 $ sudo cp -r * /export/apps/interproscan/5.25-64.0
Test:
$ module load interproscan/5.25-64.0 $ interproscan.sh -i /export/apps/interproscan/5.25-64.0/test_proteins.fasta -f tsv