hifiasm

A haplotype-resolved assembler for accurate Hifi reads.

• Version: 0.16.1
• Added: March, 2022
• Link: https://github.com/chhylp123/hifiasm

See which versions are available:

$ module avail hifiasm

Load one version into your environment and run it:

$ module load hifiasm/0.16.1
$ hifiasm

Notes from the sysadmin during installation.

$ cd /tmp
$ wget https://github.com/chhylp123/hifiasm/archive/refs/tags/0.16.1.tar.gz
$ tar xf 0.16.1.tar.gz 
$ cd hifiasm-0.16.1
$ make
$ sudo mkdir -p /export/apps/hifiasm/0.16.1/bin
$ sudo cp hifiasm /export/apps/hifiasm/0.16.1/bin