graphlan

GraPhlAn is a software tool for producing high-quality circular representations of taxonomic and phylogenetic trees.

• Version: 1.1.3
• Added: March, 2022
• Link: https://github.com/biobakery/graphlan

See which versions are available:

$ module avail graphlan

Load one version into your environment and run it:

$ module load graphlan/1.1.3
$ graphlan.py  -h

Notes from the sysadmin during installation:

$ cd /tmp
$ sudo mkdir -p /export/apps/graphlan/1.1.3
$ sudo chown aorth /export/apps/graphlan/1.1.3
$ module load python/2.7
$ python -m virtualenv /export/apps/graphlan/1.1.3
$ source /export/apps/graphlan/1.1.3/bin/activate
$ pip install graphlan
$ sudo chown -R root:root /export/apps/graphlan/1.1.3