eXpress

eXpress is a streaming tool for quantifying the abundances of a set of target sequences from sampled subsequences.

• Version: 1.5.1
• Added: November, 2015
• Link: http://bio.math.berkeley.edu/eXpress

See versions of eXpress which are available:

$ module avail express

Load and run eXpress:

$ module load express/1.5.1
$ express

Notes from the sysadmin during installation:

$ wget http://bio.math.berkeley.edu/eXpress/downloads/express-1.5.1/express-1.5.1-linux_x86_64.tgz
$ tar -xvf express-1.5.1-linux_x86_64.tgz
$ cd express-1.5.1-linux_x86_64
$ sudo mkdir -p /export/apps/express/1.5.1/
$ sudo cp -r . /export/apps/express/1.5.1/