dorado

Dorado is a high-performance, easy-to-use, open source basecaller for Oxford Nanopore reads.

• Version: 0.8.0
• Added: September, 2023
• Updated: September, 2024
• Link: https://github.com/nanoporetech/dorado

See which versions are available:

$ module avail dorado

Load one version into your environment and run it:

$ module load dorado/0.8.0
$ dorado

Notes from the sysadmin during installation:

$ cd /tmp
$ wget https://cdn.oxfordnanoportal.com/software/analysis/dorado-0.8.0-linux-x64.tar.gz
$ tar xf dorado-0.8.0-linux-x64.tar.gz
$ sudo cp -r dorado-0.8.0-linux-x64 /export/apps/dorado/0.8.0