Dnaapler is a simple tool that reorients complete circular microbial genomes.
See versions that are available:
$ module avail dnaapler
Load one version into your environment and run it:
$ module load dnaapler/1.2.0 $ dnaapler
Notes from the sysadmin during installation.
<code>$ sudo mkdir -p /export/apps/dnaapler/1.2.0 $ sudo chown -R aorth /export/apps/dnaapler/1.2.0 $ module load python/3.10 $ python -m venv /export/apps/dnaapler/1.2.0/.venv $ source /export/apps/dnaapler/1.2.0/.venv/bin/activate $ python -m pip install -U pip setuptools wheel $ python -m pip install dnaapler==1.2.0 $ sudo chown -R root:root /export/apps/dnaapler/1.2.0</p>