Cooler is a support library for a sparse, compressed, binary persistent storage format, also called cooler, used to store genomic interaction data, such as Hi-C contact matrices.
See which versions of cooler are available:
$ module avail cooler
Load one version into your environment and run it:
$ module load cooler/0.8.10 $ cooler
Notes from the sysadmin during installation:
$ sudo mkdir -p /export/apps/cooler/0.8.10 $ sudo chown aorth /export/apps/cooler/0.8.10 $ python3 -m venv /export/apps/cooler/0.8.10 $ source /export/apps/cooler/0.8.10/bin/activate $ pip install cooler==0.8.10 $ sudo chown -R root:root /export/apps/cooler/0.8.10