====== transabyss ======
De novo assembly of RNAseq data using ABySS.

===== Information =====

  * Version: 2.0.1
  * Added: January, 2023
  * Link: https://github.com/bcgsc/transabyss

===== Usage =====

See which versions are available:
<code>$ module avail transabyss</code>

Load one version into your environment and run it:
<code>$ module load transabyss/2.0.1
$ transabyss</code>

===== Installation ======
Notes from the sysadmin during installation:

<code>$ cd /tmp
$ wget https://github.com/bcgsc/transabyss/releases/download/2.0.1/transabyss-2.0.1.zip
$ unzip transabyss-2.0.1.zip
$ sudo mkdir -p /export/apps/transabyss/2.0.1
$ sudo chown aorth /export/apps/transabyss/2.0.1
$ module load python/3.9
$ python -m venv /export/apps/transabyss/2.0.1/.venv
$ source /export/apps/transabyss/2.0.1/.venv/bin/activate
$ python -m pip install --upgrade pip setuptools wheel
$ python -m pip install python-igraph
$ cp -r . /export/apps/transabyss/2.0.1</code>