====== staramr ====== Scans genome contigs against the ResFinder, PlasmidFinder, and PointFinder databases. ===== Information ===== * Version: 0.11.0 * Added: February, 2025 * Link: https://github.com/phac-nml/staramr ===== Usage ===== See versions that are available: $ module avail staramr Load one version into your environment and run it: $ module load staramr/0.11.0 $ staramr db info ===== Installation ====== Notes from the sysadmin during installation. $ module load python/3.10 $ sudo mkdir -p /export/apps/staramr/0.11.0 $ sudo chown aorth /export/apps/staramr/0.11.0 $ python3 -m venv /export/apps/staramr/0.11.0 $ source /export/apps/staramr/0.11.0/bin/activate $ pip install -U pip setuptools wheel $ pip install staramr==0.11.0 $ sudo chown -R root /export/apps/staramr/0.11.0