====== Snakemake ======
The Snakemake workflow management system is a tool to create reproducible and scalable data analyses

===== Information =====

  * Version: 6.15 (real version 6.15.5)
  * Added: October, 2019
  * Updated: February, 2022
  * Link: https://snakemake.readthedocs.io/en/stable/

===== Usage =====

See versions of snakemake which are available:
<code>$ module avail snakemake</code>

Load one version into your environment and run it:
<code>$ module load snakemake/6.15
$ snakemake</code>

===== Installation ======
Notes from the sysadmin during installation:

<code>$ sudo mkdir -p /export/apps/snakemake/6.15
$ sudo chown aorth:aorth /export/apps/snakemake/6.15
$ python3.6 -m venv /export/apps/snakemake/6.15/.venv
$ source /export/apps/snakemake/6.15/.venv/bin/activate
$ pip install --upgrade pip setuptools
$ pip install 'snakemake==6.15.*'
$ sudo chown -R root:root /export/apps/snakemake/6.15</code>