====== seqqs ====== Seqqs (SEQuence Quality Statistics, pronounced "seeks") is a C library for quickly gathering quality statistics from sequence files. ===== Information ===== * Version: git-3d053750 * Added: March, 2015 * Link: https://github.com/vsbuffalo/seqqs ===== Usage ===== === See versions of seqqs which are available === $ module avail seqqs === Load a module and run seqqs === $ module load seqqs/git-3d053750 $ seqqs in.fq ===== Installation ====== Notes from the sysadmin during installation: $ cd ~/src/git $ git clone https://github.com/vsbuffalo/seqqs.git $ cd seqqs $ sed -i 's/CC = gcc/CC = clang/' Makefile $ sudo mkdir -p /export/apps/seqqs/git-3d053750/bin $ sudo cp pairs seqqs /export/apps/seqqs/git-3d053750/bin $ sudo cp README.md /export/apps/seqqs/git-3d053750 **Note:** Developer uses clang, so let's also use it.