====== rcorrector ======
Rcorrector(RNA-seq error CORRECTOR) is a kmer-based error correction method for RNA-seq data.
Rcorrector can also be applied to other type of sequencing data where the read coverage is non-uniform, such as single-cell sequencing.
===== Information =====
* Version: 1.0.5
* Added: January, 2023
* Link: https://github.com/mourisl/Rcorrector
===== Usage =====
See versions which are available:
$ module avail rcorrector
Load one version into your environment and run it:
$ module load rcorrector/1.0.5
$ rcorrector
===== Installation ======
Notes from the sysadmin during installation:
$ cd /tmp
$ wget https://github.com/mourisl/Rcorrector/archive/refs/tags/v1.0.5.tar.gz
$ tar xf v1.0.5.tar.gz
$ cd Rcorrector-1.0.5
$ make
$ chmod +x run_rcorrector.pl
$ sudo mkdir -p /export/apps/rcorrector/1.0.5/bin
$ sudo cp rcorrector jellyfish/bin/jellyfish run_rcorrector.pl /export/apps/rcorrector/1.0.5/bin