====== pod5 ======
POD5 is a file format for storing nanopore dna data in an easily accessible way. The format is able to be written in a streaming manner which allows a sequencing instrument to directly write the format.
Data in POD5 is stored using Apache Arrow, allowing users to consume data in many languages using standard tools.
===== Information =====
* Version: 0.3.2
* Added: December, 2023
* Link: https://github.com/nanoporetech/pod5-file-format
===== Usage =====
See versions that are available:
$ module avail pod5
Load one version into your environment and run it:
$ module load pod5/0.3.2
$ pod5 -v
===== Installation ======
Notes from the sysadmin during installation.
$ sudo mkdir -p /export/apps/pod5/0.3.2
$ sudo chown aorth /export/apps/pod5/0.3.2
$ module load python/3.9
$ python -m venv /export/apps/pod5/0.3.2
$ source /export/apps/pod5/0.3.2/bin/activate
$ pip install --upgrade pip wheel setuptools
$ sudo chown -R root:root /export/apps/pod5/0.3.2