====== nQuire ======
A statistical framework for ploidy estimation using NGS short-read data.

===== Information =====

  * Version: git-a990a88e
  * Added: May, 2021
  * Link: https://github.com/clwgg/nQuire

===== Usage =====

See which versions of nQuire are available:
<code>$ module avail nQuire</code>

Load one version into your environment and run it:
<code>$ module load nQuire/git-a990a88e
$ nQuire</code>

Note: you can control the number of CPU threads used by nQuire with the ''-t'' option. Please make sure to match this with the number of threads you specified in your SLURM SBATCH allocation.

===== Installation ======

Notes from the sysadmin during installation:

<code>$ cd /tmp
$ git clone --recursive https://github.com/clwgg/nQuire
$ cd nQuire
$ make submodules
$ make
$ sudo mkdir -p /export/apps/nQuire/git-a990a88e/bin
$ sudo cp nQuire /export/apps/nQuire/git-a990a88e/bin
$ sudo cp README.org LICENSE /export/apps/nQuire/git-a990a88e</code>