====== ngmlr ======

NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations.

===== Information =====

  * Version: 0.2.7
  * Added: September, 2020
  * Link: https://github.com/philres/ngmlr

===== Usage =====

See which versions of ngmlr are available:
<code>$ module avail ngmlr</code>

Load one version into your environment and run it:
<code>$ module load ngmlr/0.2.7
$ ngmlr</code>

===== Installation ======

Notes from the sysadmin during installation:

<code>
$ cd /tmp
$ wget https://github.com/philres/ngmlr/releases/download/v0.2.7/ngmlr-0.2.7-linux-x86_64.tar.gz
$ tar xf ngmlr-0.2.7-linux-x86_64.tar.gz
$ sudo mkdir -p /export/apps/ngmlr/0.2.7/bin
$ sudo cp ngmlr-0.2.7/ngmlr /export/apps/ngmlr/0.2.7/bin
</code>