====== nanoqc ======
Quality control tools for long read sequencing data aiming to replicate some of the plots made by fastQC.

===== Information =====

  * Version: git-a7bcbdce
  * Added: December, 2023
  * Link: https://github.com/wdecoster/nanoQC

===== Usage =====

See versions that are available:
<code>$ module avail nanoqc</code>

Load one version into your environment and run it:
<code>$ module load nanoqc/git-a7bcbdce
$ nanoQC</code>


===== Installation ======
Notes from the sysadmin during installation.

<code>$ cd /tmp
$ git clone https://github.com/wdecoster/nanoQC.git
$ cd nanoQC
$ sudo mkdir -p /export/apps/nanoqc/git-a7bcbdce
$ sudo chown aorth /export/apps/nanoqc/git-a7bcbdce
$ module load python/3.9
$ python -m venv /export/apps/nanoqc/git-a7bcbdce
$ source /export/apps/nanoqc/git-a7bcbdce/venv/bin/activate
$ pip install --upgrade pip wheel setuptools
$ python setup.py install
$ sudo chown -R root:root /export/apps/nanoqc/git-a7bcbdce</code>