====== Kallisto ======

kallisto is a program for quantifying abundances of transcripts from RNA-Seq data.

===== Information =====

  * Latest Version: 0.43.0
  * Added: March, 2016
  * Updated: September, 2016
  * Link: https://pachterlab.github.io/kallisto/

===== Usage =====

See which versions of kallisto are available:
<code>$ module avail kallisto
</code>

Load kallisto
<code>$ module load kallisto/0.42.4</code>

===== Installation ======

Notes from the sysadmin during installation:

<code>
$ cd /tmp
$ wget https://github.com/pachterlab/kallisto/releases/download/v0.43.0/kallisto_linux-v0.43.0.tar.gz
$ tar -xvf kallisto_linux-v0.43.0.tar.gz
$ cd kallisto_linux-v0.43.0
$ sudo mkdir /export/apps/kallisto/0.43.0/
$ sudo cp -rv . /export/apps/kallisto/0.43.0/
</code>