====== Kaiju ======

Kaiju is a program for the taxonomic classification of high-throughput sequencing reads, e.g., Illumina or Roche/454, from whole-genome sequencing of metagenomic DNA.

===== Information =====

  * Latest Version: 1.8.2
  * Added: November, 2016
  * Updated: November, 2021
  * Link: https://kaiju.binf.ku.dk/
  
===== Usage =====

See which versions of kaiju are available:
<code>$ module avail kaiju</code>

Load one version into your environment and run it:
<code>$ module load kaiju/1.8.2
$ kaiju</code>

===== Installation ======

Notes from the sysadmin during installation:

<code>$ cd /tmp
$ wget https://github.com/bioinformatics-centre/kaiju/releases/download/v1.8.2/kaiju-v1.8.2-linux-x86_64.tar.gz
$ tar xf kaiju-v1.8.2-linux-x86_64.tar.gz
$ sudo mkdir -p /export/apps/kaiju/1.8.2
$ sudo cp -r kaiju-v1.8.2-linux-x86_64-static/* /export/apps/kaiju/1.8.2</code>