====== HPG Variant ======
HPG Variant is a tool for fast, memory-efficient counting of k-mers in DNA

===== Information =====

  * Version: 1.0
  * Added: April, 2015
  * Link: https://github.com/opencb/hpg-variant

===== Usage =====

=== See versions of hpg-variant which are available ===
<code>$ module avail hpg-variant</code>

=== Load and run hpg-variant ===
<code>$ module load hpg-variant
$ hpg-var-effect
$ hpg-var-gwas
$ hpg-var-vcf</code>

===== Installation ======
Notes from the sysadmin during installation:

<code>cd /tmp
scl enable devtoolset-2 bash
git clone https://github.com/opencb/hpg-variant.git
git checkout v1.0
git submodule update --init
scons -j4
sudo mkdir -p /export/apps/hpg-variant/1.0
sudo cp -r . /export/apps/hpg-variant/1.0
</code>