====== ea-utils ====== Command-line tools for processing biological sequencing data. Barcode demultiplexing, adapter trimming, etc. Primarily written to support an Illumina based pipeline - but should work with any FASTQs. ===== Information ===== * Version: 1.04.807 * Added: October, 2015 * Updated: November, 2018 * Link: https://expressionanalysis.github.io/ea-utils/ ===== Usage ===== See available versions: $ module avail ea-utils Load one version into your environment: $ module load ea-utils/1.04.807 ===== Installation ====== Notes from the sysadmin during installation: $ cd /tmp $ wget https://github.com/ExpressionAnalysis/ea-utils/archive/1.04.807.tar.gz $ sudo yum install gsl-devel perl-Test-Base $ tar xf 1.04.807.tar.gz $ cd ea-utils-1.04.807/clipper $ make $ sudo mkdir -p /export/apps/ea-utils/1.04.807 $ sudo chown aorth /export/apps/ea-utils/1.04.807 $ make install PREFIX=/export/apps/ea-utils/1.04.807 $ sudo yum remove gsl-devel perl-Test-Base $ sudo chown -R root:root /export/apps/ea-utils/1.04.807