====== ClonalFrameML ======
ClonalFrameML performs efficient inference of recombination in bacterial genomes.

===== Information =====

  * Version: 1.0
  * Added: November, 2015
  * Link: https://github.com/xavierdidelot/ClonalFrameML

===== Usage =====

See versions of ClonalFrameML which are available:
<code>$ module avail clonalframeml</code>

Load and run ClonalFrameML:
<code>$ module load clonalframeml/1.2
$ ClonalFrameML</code>

===== Installation ======
Notes from the sysadmin during installation:

<code>$ cd /tmp
$ wget https://github.com/xavierdidelot/ClonalFrameML/archive/v1.0.tar.gz
$ tar -xvf v1.0.tar.gz
$ cd ClonalFrameML-1.0/src
$ make
$ sudo mkdir -p /export/apps/clonalframeml/1.0/
$ sudo cp ClonalFrameML /export/apps/clonalframeml/1.0/
</code>