====== bamtools ====== Bamtools provides C++ API & command-line toolkit for working with BAM data. ===== Information ===== * Version: 2.5.1 * Added: February, 2016 * Updated: December, 2017 * Link: https://github.com/pezmaster31/bamtools ===== Usage ===== See which versions of bamtools are available: $ module avail bamtools Load one version into your environment and run it: $ module load bamtools/2.5.1 $ bamtools ===== Installation ====== Notes from the sysadmin during installation: $ cd /tmp $ wget https://github.com/pezmaster31/bamtools/archive/v2.5.1.zip $ unzip v2.5.1.zip $ cd bamtools-2.5.1 $ mkdir build $ cd build $ sudo yum install cmake3 $ sudo mkdir -p /export/apps/bamtools/2.5.1 $ sudo chown aorth /export/apps/bamtools/2.5.1 $ cmake3 -DCMAKE_INSTALL_PREFIX=/export/apps/bamtools/2.5.1 .. $ make install $ sudo chown -R root:root /export/apps/bamtools/2.5.1