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vcftools-software

VCFtools

VCFtools is a program package designed for working with VCF files, such as those generated by the 1000 Genomes Project.

Information

Usage

See which versions of VCFtools are available:

$ module avail vcftools

Load one version into your environment:

$ module load vcftools/0.1.15

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ wget https://github.com/vcftools/vcftools/releases/download/v0.1.15/vcftools-0.1.15.tar.gz
$ tar xf vcftools-0.1.15.tar.gz 
$ cd vcftools-0.1.15
./configure --prefix=/export/apps/vcftools/0.1.15
$ make -j4
$ sudo mkdir /export/apps/vcftools/0.1.15
$ sudo chown aorth /export/apps/vcftools/0.1.15
$ make install
$ sudo chown -R root:root /export/apps/vcftools/0.1.15
vcftools-software.txt · Last modified: 2017/12/25 20:59 by aorth