User Tools

Site Tools


using-slurm

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
using-slurm [2017/06/07 10:11]
aorth
using-slurm [2018/11/29 12:25] (current)
aorth [Batch job using local storage]
Line 62: Line 62:
 blastn -query ~/​data/​sequences/​drosoph_14_sequences.seq -db nt -num_threads 4 -out blast.out</​code>​ blastn -query ~/​data/​sequences/​drosoph_14_sequences.seq -db nt -num_threads 4 -out blast.out</​code>​
  
-All output is directed to ''​$WORKDIR/'',​ which is the temporary folder on the compute node. See these slides from [[http://​alanorth.github.io/​hpc-users-group3/#/​2|HPC Users Group #3]] for more info.+All output is directed to ''​$WORKDIR/'',​ which is the temporary folder on the compute node. See these slides from [[https://​alanorth.github.io/​hpc-users-group3/#/​2|HPC Users Group #3]] for more info.
  
 ==== Check queue status ==== ==== Check queue status ====
 <​code>​squeue</​code>​ <​code>​squeue</​code>​
using-slurm.1496819460.txt.gz · Last modified: 2017/06/07 10:11 by aorth