User Tools

Site Tools


using-slurm

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
Last revision Both sides next revision
using-slurm [2019/11/11 15:04]
aorth
using-slurm [2020/10/08 13:06]
jean-baka [Batch jobs]
Line 41: Line 41:
  
 ==== Batch jobs ==== ==== Batch jobs ====
-Request 4 CPUs for a NCBI BLAST+ job in the ''batch'' partition.  Create a file //blast.sbatch//:+We are writing a SLURM script below. The parameters in its header request 4 CPUs for in the ''batch'' partition, and name our job "blastn"This name is only used internally by SLURM for reporting purposes. So let's go ahead and ceate a file //blast.sbatch//:
 <code>#!/usr/bin/env bash <code>#!/usr/bin/env bash
 #SBATCH -p batch #SBATCH -p batch
using-slurm.txt · Last modified: 2020/10/08 13:06 by jean-baka