User Tools

Site Tools


unicycler-software

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
Last revision Both sides next revision
unicycler-software [2019/02/15 21:16]
aorth
unicycler-software [2019/02/15 21:21]
aorth
Line 32: Line 32:
 mkdir -p ${OUTDIR} mkdir -p ${OUTDIR}
  
-# run unicycler with the number of threads ​requested ​by SLURM+# run unicycler with the number of threads ​allocated ​by SLURM
 unicycler -t ${SLURM_NTASKS} -1 ${DATADIR}/​short_reads_1.fastq.gz -2 ${DATADIR}/​short_reads_2.fastq.gz -o ${OUTDIR} unicycler -t ${SLURM_NTASKS} -1 ${DATADIR}/​short_reads_1.fastq.gz -2 ${DATADIR}/​short_reads_2.fastq.gz -o ${OUTDIR}
  
unicycler-software.txt · Last modified: 2019/02/15 21:36 by aorth