ILRI Research Computing

User Tools

Site Tools

You are here: start » tutorials
tutorials

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
Next revision 		Previous revision
tutorials [2020/04/09 14:50]
jean-baka 		tutorials [2020/09/02 11:39] (current)
jean-baka
Line 3: Line 3:
 Here we list tutorials (mostly in bioinformatics) to guide you in your data analyses. Some are using UNIX commandline tools that are installed on the HPC, some are using [[https://www.r-project.org/|the fabulous R software]], and some are to be ran on graphical interface software such as the nice [[http://ugene.net/|Unipro UGENE]]. Here we list tutorials (mostly in bioinformatics) to guide you in your data analyses. Some are using UNIX commandline tools that are installed on the HPC, some are using [[https://www.r-project.org/|the fabulous R software]], and some are to be ran on graphical interface software such as the nice [[http://ugene.net/|Unipro UGENE]].
  
-Please try them, have fun, and most importantly, [[mailto:a.orth@cgiar.org,b.waweru@cgiar.org,j.domelevoentfellner@cgiar.org|let us know your feedback]]: we will endeavour to fix any mistake or inaccuracy, and to improve the contents of these tutos!+Please try them, have fun, and most importantly, [[mailto:b.waweru@cgiar.org,j.domelevoentfellner@cgiar.org|let us know your feedback]]: we will endeavour to fix any mistake or inaccuracy, and to improve the contents of these tutos!
  
  
-  * [[tutorials:simple-sequence-analysis|Simple sequence analysis (mostly for **Sanger** data)]] +  * [[tutorials:simple-sequence-analysis|Simple sequence analysis (mostly for Sanger data)]] 
-  * [[tutorials:population-diversity|Single-species **population diversity** studies (e.g. based on SNP markers from WGS or SNP chips)]] +  * [[tutorials:population-diversity|Single-species population diversity studies (e.g. based on SNP markers from WGS or SNP chips)]] 
-  * [[tutorials:metagenomics|**Metagenomics** (across-species diversity in environmental samples, microbiomes, etc)]] +  * [[tutorials:metagenomics|Metagenomics (across-species diversity in environmental samples, microbiomes, etc)]] 
-  * [[tutorials:ngs|Initial analysis steps for everything starting with short-read data ("**NGS**")]] +  * [[tutorials:ngs|Initial analysis steps for everything starting with short-read data ("NGS")]] 
-  * [[tutorials:genome-assembly|Tutorials on **genome assembly** from short or long reads]]+  * [[tutorials:genome-assembly|Tutorials on genome assembly from short or long reads]]
  
  
  
tutorials.1586443808.txt.gz · Last modified: 2020/04/09 14:50 by jean-baka

Page Tools

Except where otherwise noted, content on this wiki is licensed under the following license: CC Attribution-Noncommercial-Share Alike 4.0 International
CC Attribution-Noncommercial-Share Alike 4.0 International Donate Powered by PHP Valid HTML5 Valid CSS Driven by DokuWiki