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trimmomatic-software
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trimmomatic-software [2015/09/25 08:22] joguya created |
trimmomatic-software [2018/06/01 23:03] (current) aorth |
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| Line 4: | Line 4: | ||
| ===== Information ===== | ===== Information ===== | ||
| - | * Version: 0.33 | + | * Version: 0.38 |
| * Added: September, 2015 | * Added: September, 2015 | ||
| + | * Updated: June, 2018 | ||
| * Link: http:// | * Link: http:// | ||
| Line 13: | Line 14: | ||
| < | < | ||
| - | Load and run trimmomatic: | + | Load one version into your environment |
| - | < | + | < |
| $ trimmomatic</ | $ trimmomatic</ | ||
| Line 20: | Line 21: | ||
| Notes from the sysadmin during installation: | Notes from the sysadmin during installation: | ||
| - | < | + | < |
| - | $ wget http:// | + | $ wget http:// |
| - | $ cd Trimmomatic-0.33 | + | $ unzip Trimmomatic-0.38.zip |
| - | $ sudo mkdir -p / | + | $ sudo mkdir -p / |
| - | $ sudo cp -rv . / | + | $ sudo cp -r Trimmomatic-0.38/* / |
| - | </ | + | |
| - | I created a wrapper shell script named '' | + | Trimmomatic is distributed as a jar file and is not easy for users to run. I created a wrapper shell script named '' |
| - | # | + | |
| + | < | ||
| readonly PREFIX=$(dirname $0) | readonly PREFIX=$(dirname $0) | ||
| - | java -jar $PREFIX/ | + | java -jar $PREFIX/ |
| - | </ | + | |
trimmomatic-software.1443169357.txt.gz · Last modified: 2015/09/25 08:22 by joguya
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