Trim Galore is a wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data.
See versions of trimgalore which are available:
$ module avail trimgalore
Load one version into your environment and run it:
$ module load trimgalore/0.6.7 $ trim_galore
Notes from the sysadmin during installation:
$ cd /tmp $ wget https://github.com/FelixKrueger/TrimGalore/archive/refs/tags/0.6.7.tar.gz $ tar xf 0.6.7.tar.gz $ sudo cp -r TrimGalore-0.6.7 /export/apps/trimgalore/0.6.7