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stringtie-software [2015/08/04 12:02]
aorth
stringtie-software [2018/06/11 18:52] (current)
aorth
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 ===== Information ===== ===== Information =====
  
-  * Version: 1.0.4+  * Version: 1.3.4d
   * Added: July, 2014   * Added: July, 2014
-  * Updated: ​August2015+  * Updated: ​June2018
   * Link: https://​ccb.jhu.edu/​software/​stringtie/​   * Link: https://​ccb.jhu.edu/​software/​stringtie/​
  
 ===== Usage ===== ===== Usage =====
  
-=== See versions of stringtie which are available ​===+See versions of stringtie which are available:
 <​code>​$ module avail stringtie</​code>​ <​code>​$ module avail stringtie</​code>​
  
-=== Load latest version and print help === +Load the latest version ​into your environment ​and print help: 
-<​code>​$ module load stringtie/​1.0.4+<​code>​$ module load stringtie/​1.3.4d
 $ stringtie -h</​code>​ $ stringtie -h</​code>​
  
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 <​code>​$ cd /tmp <​code>​$ cd /tmp
-$ wget http://​ccb.jhu.edu/​software/​stringtie/​dl/​stringtie-1.0.4.tar.gz +$ wget http://​ccb.jhu.edu/​software/​stringtie/​dl/​stringtie-1.3.4d.tar.gz 
-$ scl enable devtoolset-3 bash +$ tar xf stringtie-1.3.4d.tar.gz 
-$ tar xf stringtie-1.0.4.tar.gz +$ cd stringtie-1.3.4d
-$ cd stringtie-1.0.+
-$ scl enable devtoolset-3 bash+
 $ make release $ make release
-$ sudo mkdir -p /​export/​apps/​stringtie/​1.0.4/bin +$ sudo mkdir -p /​export/​apps/​stringtie/​1.3.4d/bin 
-$ sudo cp stringtie /​export/​apps/​stringtie/​1.0.4/bin +$ sudo cp stringtie /​export/​apps/​stringtie/​1.3.4d/bin 
-$ sudo cp LICENSE ​README /​export/​apps/​stringtie/​1.0.4</​code>​+$ sudo cp README ​LICENSE ​/​export/​apps/​stringtie/​1.3.4d</​code>​
stringtie-software.txt · Last modified: 2018/06/11 18:52 by aorth