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star-software

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STAR

STAR (Spliced Transcripts Alignment to a Reference) is an RNA-seq aligner.

Information

Usage

See which versions of star are available:

$ module avail star

Load one into your environment and run it:

$ module load STAR/2.5.3a
$ STAR

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ wget https://github.com/alexdobin/STAR/archive/2.5.3a.tar.gz
$ tar xf 2.5.3a.tar.gz
$ sudo mkdir /export/apps/star/2.5.3a/bin
$ sudo cp -rv STAR-2.5.3a/bin/Linux_x86_64/STAR* /export/apps/star/2.5.3a/bin
star-software.txt · Last modified: 2017/09/20 16:05 by aorth