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sratoolkit-software [2017/03/08 15:14]
joguya created
sratoolkit-software [2018/06/01 22:42] (current)
aorth
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 ===== Information ===== ===== Information =====
  
-  * Latest version: 2.8.2+  * Latest version: 2.9.0
   * Added: August, 2014   * Added: August, 2014
-  * Updated: ​March2014 +  * Updated: ​June2018 
-  * Link: http://​trace.ncbi.nlm.nih.gov/​Traces/​sra/​sra.cgi?​view=software+  * Link: https://​trace.ncbi.nlm.nih.gov/​Traces/​sra/​sra.cgi?​view=software
  
 ===== Usage ===== ===== Usage =====
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 <​code>​$ module avail sratoolkit</​code>​ <​code>​$ module avail sratoolkit</​code>​
  
-Load sratoolkit+Load one version into your environment
-<​code>​$ module load sratoolkit</​code>​+<​code>​$ module load sratoolkit/2.9.0</​code>​
  
 ===== Installation ====== ===== Installation ======
 Notes from the sysadmin during installation:​ Notes from the sysadmin during installation:​
  
-<​code>​ +<​code>​$ cd /tmp 
-$ cd /tmp +$ wget https://​ftp-trace.ncbi.nlm.nih.gov/​sra/​sdk/​2.9.0/​sratoolkit.2.9.0-centos_linux64.tar.gz 
-$ wget -qO- https://​ftp-trace.ncbi.nlm.nih.gov/​sra/​sdk/​2.8.2/​sratoolkit.2.8.2-centos_linux64.tar.gz ​| tar xvz +tar xf sratoolkit.2.9.0-centos_linux64.tar.gz 
-cd sratoolkit.2.8.2-centos_linux64+$ sudo mkdir /​export/​apps/​sratoolkit/​2.9.0 
-$ scl enable devtoolset-3 bash +$ sudo cp -r sratoolkit.2.9.0-centos_linux64/​* ​/​export/​apps/​sratoolkit/​2.9.0</​code>​
-$ sudo mkdir /​export/​apps/​sratoolkit/​2.8.2/ +
-$ sudo cp -r . /​export/​apps/​sratoolkit/​2.8.2/ +
-</​code>​ +
sratoolkit-software.txt · Last modified: 2018/06/01 22:42 by aorth