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sratoolkit-software

SRA Toolkit

A collection of tools and libraries for using data in the INSDC Sequence Read Archives.

Information

Usage

See versions of SRAToolkit which are available:

$ module avail sratoolkit

Load sratoolkit:

$ module load sratoolkit

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ wget -qO- https://ftp-trace.ncbi.nlm.nih.gov/sra/sdk/2.8.2/sratoolkit.2.8.2-centos_linux64.tar.gz | tar xvz
$ cd sratoolkit.2.8.2-centos_linux64/
$ scl enable devtoolset-3 bash
$ sudo mkdir /export/apps/sratoolkit/2.8.2/
$ sudo cp -r . /export/apps/sratoolkit/2.8.2/
sratoolkit-software.txt · Last modified: 2017/03/08 15:14 by joguya