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sratoolkit-software

SRA Toolkit

A collection of tools and libraries for using data in the INSDC Sequence Read Archives.

Information

Usage

See versions of SRAToolkit which are available:

$ module avail sratoolkit

Load one version into your environment:

$ module load sratoolkit/2.9.0

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ wget https://ftp-trace.ncbi.nlm.nih.gov/sra/sdk/2.9.0/sratoolkit.2.9.0-centos_linux64.tar.gz
$ tar xf sratoolkit.2.9.0-centos_linux64.tar.gz
$ sudo mkdir /export/apps/sratoolkit/2.9.0
$ sudo cp -r sratoolkit.2.9.0-centos_linux64/* /export/apps/sratoolkit/2.9.0
sratoolkit-software.txt · Last modified: 2018/06/01 22:42 by aorth