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soapaligner-software

SOAPaligner/soap2

Genome-wide ab initio detection of splice junction sites from RNA-Seq.

Information

Usage

See which versions of SOAPaligner are available:

$ module avail SOAPaligner

Load SOAPaligner

$ module load SOAPaligner/2.21

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ wget http://soap.genomics.org.cn/down/soap2.21release.tar.gz
$ tar -xvf soap2.21release.tar.gz
$ sudo mkdir -p /export/apps/SOAPaligner/2.21
$ sudo cp -r . /export/apps/SOAPaligner/2.21/
soapaligner-software.txt · Last modified: 2016/03/24 16:57 by joguya