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snpmeta-software [2016/05/23 15:45] (current)
joguya created
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 +====== SNPMeta ======
 +
 +SNPMeta is a Python and BioPython-based tool to generate "​metadata"​ for single nucleotide polymorphisms (SNPs) for easy filtering, or submission to SNP databases.
 +
 +===== Information =====
 +
 +  * Version: 2.0
 +  * Added: May, 2016
 +  * Link: http://​www.tc.umn.edu/​~konox006/​Code/​SNPMeta/​
 +
 +===== Usage =====
 +
 +See which versions of snpmeta are available:
 +<​code>​$ module avail snpmeta</​code>​
 +
 +Load snpmeta
 +<​code>​$ module load snpmeta/​2.0</​code>​
 +
 +===== Installation ======
 +
 +Notes from the sysadmin during installation:​
 +
 +<​code>​$ cd /tmp
 +$ git clone git@github.com:​pmorrell/​SNPMeta.git
 +$ cd SNPMeta/
 +$ chmod 0755 SNPMeta.py Helper_Scripts/​*
 +$ sudo mkdir -p /​export/​apps/​snpmeta/​2.0/​
 +$ sudo cp -rv . /​export/​apps/​snpmeta/​2.0/​
 +</​code>​
  
snpmeta-software.txt · Last modified: 2016/05/23 15:45 by joguya