User Tools

Site Tools


seqtk-software

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
seqtk-software [2018/02/21 10:21]
aorth
seqtk-software [2019/10/25 15:33] (current)
aorth
Line 4: Line 4:
 ===== Information ===== ===== Information =====
  
-  * Version: 1.2-r102+  * Version: 1.3
   * Added: February, 2018   * Added: February, 2018
 +  * Updated: October, 2019
   * Link: https://​github.com/​lh3/​seqtk   * Link: https://​github.com/​lh3/​seqtk
  
Line 14: Line 15:
  
 Load one version into your environment and run it: Load one version into your environment and run it:
-<​code>​$ module load seqtk/1.2-r102+<​code>​$ module load seqtk/1.3
 $ seqtk</​code>​ $ seqtk</​code>​
  
Line 21: Line 22:
  
 <​code>​$ cd /tmp <​code>​$ cd /tmp
-git clone https://​github.com/​lh3/​seqtk.git +wget https://​github.com/​lh3/​seqtk/archive/v1.3.tar.gz 
-$ cd seqtk+$ tar xf v1.3.tar.gz 
 +$ cd seqtk-1.3 
 +$ scl enable devtoolset-7 bash
 $ make $ make
-$ sudo mkdir -p /​export/​apps/​seqtk/​1.2-r102/bin +$ sudo mkdir -p /​export/​apps/​seqtk/​1.3/bin 
-$ sudo cp seqtk /​export/​apps/​seqtk/​1.2-r102/​bin</​code>​+$ sudo cp seqtk /​export/​apps/​seqtk/​1.3/​bin</​code>​
seqtk-software.txt · Last modified: 2019/10/25 15:33 by aorth