User Tools

Site Tools


seqkit-software

Table of Contents

seqkit

SeqKit - a cross-platform and ultrafast toolkit for FASTA/Q file manipulation.

Information

Usage

See versions of seqkit which are available:

$ module avail seqkit

Load one version into your environment and run it:

$ module load seqkit/0.7.2
$ seqkit

Installation

Notes from the sysadmin during installation:

$ wget https://github.com/shenwei356/seqkit/releases/download/v0.7.2/seqkit_linux_amd64.tar.gz
$ tar xf seqkit_linux_amd64.tar.gz
$ sudo mkdir -p /export/apps/seqkit/0.7.2/bin
$ sudo cp seqkit /export/apps/seqkit/0.7.2/bin
seqkit-software.txt · Last modified: 2018/02/21 10:20 by aorth