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rmblast-software [2015/02/14 13:48] (current)
aorth created
Line 1: Line 1:
 +====== rmblast ======
 +RMBlast is a RepeatMasker compatible version of the standard NCBI BLAST suite. The primary difference between this distribution and the NCBI distribution is the addition of a new program "​rmblastn"​ for use with RepeatMasker and RepeatModeler.
  
 +===== Information =====
 +
 +  * Version: 2.2.28
 +  * Added: February, 2015
 +  * Link: http://​repeatmasker.org/​RMBlast.html
 +
 +===== Usage =====
 +
 +=== See versions of rmblast which are available ===
 +<​code>​module avail rmblast</​code>​
 +
 +===== Installation ======
 +Notes from the sysadmin during installation:​
 +
 +<​code>​$ cd /tmp
 +$ wget ftp://​ftp.ncbi.nlm.nih.gov/​blast/​executables/​rmblast/​LATEST/​ncbi-rmblastn-2.2.28-x64-linux.tar.gz
 +$ tar xf ncbi-rmblastn-2.2.28-x64-linux.tar.gz
 +$ sudo cp -r ncbi-rmblastn-2.2.28 /​export/​apps/​rmblast/​2.2.28</​code>​
rmblast-software.txt · Last modified: 2015/02/14 13:48 by aorth