RMBlast is a RepeatMasker compatible version of the standard NCBI BLAST suite. The primary difference between this distribution and the NCBI distribution is the addition of a new program "rmblastn" for use with RepeatMasker and RepeatModeler.
See versions of rmblast which are available:
$ module avail rmblast
Load one version into your environment and run it:
$ module load rmblast/2.10.0 $ blastn
Notes from the sysadmin during installation:
$ cd /tmp $ wget http://www.repeatmasker.org/rmblast-2.10.0+-x64-linux.tar.gz $ tar xf rmblast-2.10.0+-x64-linux.tar.gz $ sudo cp -r rmblast-2.10.0 /export/apps/rmblast/2.10.0