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rmblast-software

rmblast

RMBlast is a RepeatMasker compatible version of the standard NCBI BLAST suite. The primary difference between this distribution and the NCBI distribution is the addition of a new program "rmblastn" for use with RepeatMasker and RepeatModeler.

Information

Usage

See versions of rmblast which are available

module avail rmblast

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ wget ftp://ftp.ncbi.nlm.nih.gov/blast/executables/rmblast/LATEST/ncbi-rmblastn-2.2.28-x64-linux.tar.gz
$ tar xf ncbi-rmblastn-2.2.28-x64-linux.tar.gz
$ sudo cp -r ncbi-rmblastn-2.2.28 /export/apps/rmblast/2.2.28
rmblast-software.txt · Last modified: 2015/02/14 13:48 by aorth